Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh2P43247 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh2P43247 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.73■□□□□ 0.75
Msh2P43247 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh2P43247 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.73■□□□□ 0.75
Msh2P43247 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.73■□□□□ 0.75
Msh2P43247 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh2P43247 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh2P43247 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh2P43247 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Msh2P43247 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.72■□□□□ 0.75
Msh2P43247 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Msh2P43247 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.72■□□□□ 0.75
Msh2P43247 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.72■□□□□ 0.75
Msh2P43247 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.72■□□□□ 0.75
Msh2P43247 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Msh2P43247 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Msh2P43247 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Msh2P43247 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh2P43247 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.71■□□□□ 0.75
Msh2P43247 Gm12821-201ENSMUST00000120022 600 ntBASIC19.71■□□□□ 0.75
Msh2P43247 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Msh2P43247 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh2P43247 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh2P43247 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.7■□□□□ 0.74
Msh2P43247 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh2P43247 Mir6236-201ENSMUST00000184437 123 ntBASIC19.7■□□□□ 0.74
Msh2P43247 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.7■□□□□ 0.74
Msh2P43247 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh2P43247 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh2P43247 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh2P43247 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.7■□□□□ 0.74
Msh2P43247 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Msh2P43247 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.69■□□□□ 0.74
Msh2P43247 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.69■□□□□ 0.74
Msh2P43247 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.69■□□□□ 0.74
Msh2P43247 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh2P43247 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.68■□□□□ 0.74
Msh2P43247 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh2P43247 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Gm27454-201ENSMUST00000185090 204 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Gm43137-201ENSMUST00000198052 594 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Msh2P43247 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh2P43247 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.67■□□□□ 0.74
Msh2P43247 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msh2P43247 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Msh2P43247 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.66■□□□□ 0.74
Msh2P43247 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.66■□□□□ 0.74
Msh2P43247 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.66■□□□□ 0.74
Msh2P43247 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Grk6-206ENSMUST00000224995 2971 ntBASIC19.66■□□□□ 0.74
Msh2P43247 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh2P43247 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms