Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.95■□□□□ 0.94
HttP42859 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HttP42859 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HttP42859 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HttP42859 Gm18666-201ENSMUST00000190039 958 ntBASIC20.94■□□□□ 0.94
HttP42859 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HttP42859 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.94■□□□□ 0.94
HttP42859 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HttP42859 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HttP42859 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.94■□□□□ 0.94
HttP42859 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HttP42859 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HttP42859 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Gm2399-201ENSMUST00000104944 225 ntBASIC20.93■□□□□ 0.94
HttP42859 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.93■□□□□ 0.94
HttP42859 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HttP42859 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HttP42859 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.93■□□□□ 0.94
HttP42859 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.93■□□□□ 0.94
HttP42859 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.93■□□□□ 0.94
HttP42859 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HttP42859 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HttP42859 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HttP42859 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HttP42859 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.92■□□□□ 0.94
HttP42859 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HttP42859 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HttP42859 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HttP42859 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
HttP42859 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.91■□□□□ 0.94
HttP42859 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.91■□□□□ 0.94
HttP42859 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.91■□□□□ 0.94
HttP42859 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HttP42859 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HttP42859 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HttP42859 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HttP42859 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
HttP42859 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HttP42859 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.9■□□□□ 0.94
HttP42859 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HttP42859 Gm5417-201ENSMUST00000079706 384 ntBASIC20.9■□□□□ 0.94
HttP42859 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
HttP42859 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HttP42859 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
HttP42859 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.89■□□□□ 0.93
HttP42859 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
HttP42859 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.89■□□□□ 0.93
HttP42859 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HttP42859 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.89■□□□□ 0.93
HttP42859 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.89■□□□□ 0.93
HttP42859 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.88■□□□□ 0.93
HttP42859 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HttP42859 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HttP42859 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.87■□□□□ 0.93
HttP42859 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HttP42859 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HttP42859 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
HttP42859 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HttP42859 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HttP42859 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.86■□□□□ 0.93
HttP42859 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HttP42859 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HttP42859 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HttP42859 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HttP42859 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.85■□□□□ 0.93
HttP42859 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.85■□□□□ 0.93
HttP42859 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HttP42859 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.84■□□□□ 0.93
HttP42859 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.84■□□□□ 0.93
HttP42859 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
HttP42859 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HttP42859 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HttP42859 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms