Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
HmgclP38060 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HmgclP38060 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HmgclP38060 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
HmgclP38060 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.95■□□□□ 0.62
HmgclP38060 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.95■□□□□ 0.62
HmgclP38060 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.95■□□□□ 0.62
HmgclP38060 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HmgclP38060 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HmgclP38060 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HmgclP38060 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HmgclP38060 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HmgclP38060 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.94■□□□□ 0.62
HmgclP38060 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.94■□□□□ 0.62
HmgclP38060 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.94■□□□□ 0.62
HmgclP38060 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HmgclP38060 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
HmgclP38060 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HmgclP38060 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
HmgclP38060 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.94■□□□□ 0.62
HmgclP38060 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.94■□□□□ 0.62
HmgclP38060 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HmgclP38060 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
HmgclP38060 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.93■□□□□ 0.62
HmgclP38060 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.93■□□□□ 0.62
HmgclP38060 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HmgclP38060 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
HmgclP38060 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HmgclP38060 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HmgclP38060 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
HmgclP38060 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HmgclP38060 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.92■□□□□ 0.62
HmgclP38060 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HmgclP38060 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HmgclP38060 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HmgclP38060 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
HmgclP38060 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HmgclP38060 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HmgclP38060 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HmgclP38060 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HmgclP38060 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
HmgclP38060 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
HmgclP38060 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HmgclP38060 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HmgclP38060 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HmgclP38060 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HmgclP38060 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.91■□□□□ 0.62
HmgclP38060 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
HmgclP38060 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HmgclP38060 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.9■□□□□ 0.62
HmgclP38060 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
HmgclP38060 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HmgclP38060 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HmgclP38060 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HmgclP38060 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.89■□□□□ 0.61
HmgclP38060 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HmgclP38060 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.89■□□□□ 0.61
HmgclP38060 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HmgclP38060 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HmgclP38060 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HmgclP38060 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HmgclP38060 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HmgclP38060 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
HmgclP38060 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HmgclP38060 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HmgclP38060 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.88■□□□□ 0.61
HmgclP38060 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HmgclP38060 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HmgclP38060 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HmgclP38060 Gm7860-201ENSMUST00000121190 879 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms