Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Gm15565-201ENSMUST00000118890 427 ntBASIC31.11■■■□□ 2.57
PtprkP35822 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PtprkP35822 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PtprkP35822 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PtprkP35822 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC31.11■■■□□ 2.57
PtprkP35822 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
PtprkP35822 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PtprkP35822 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
PtprkP35822 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PtprkP35822 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
PtprkP35822 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC31.1■■■□□ 2.57
PtprkP35822 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PtprkP35822 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC31.1■■■□□ 2.57
PtprkP35822 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PtprkP35822 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PtprkP35822 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
PtprkP35822 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PtprkP35822 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC31.09■■■□□ 2.57
PtprkP35822 AL672049.1-201ENSMUST00000197943 91 ntBASIC31.08■■■□□ 2.57
PtprkP35822 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 AC152827.1-201ENSMUST00000221143 2189 ntBASIC31.08■■■□□ 2.57
PtprkP35822 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PtprkP35822 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PtprkP35822 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PtprkP35822 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PtprkP35822 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PtprkP35822 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PtprkP35822 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PtprkP35822 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PtprkP35822 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
PtprkP35822 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PtprkP35822 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PtprkP35822 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PtprkP35822 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PtprkP35822 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PtprkP35822 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PtprkP35822 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC31.03■■■□□ 2.56
PtprkP35822 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC31.03■■■□□ 2.56
PtprkP35822 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC31.03■■■□□ 2.56
PtprkP35822 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PtprkP35822 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PtprkP35822 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PtprkP35822 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PtprkP35822 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
PtprkP35822 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PtprkP35822 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC31.02■■■□□ 2.56
PtprkP35822 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC31.01■■■□□ 2.56
PtprkP35822 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC31.01■■■□□ 2.56
PtprkP35822 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
PtprkP35822 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
PtprkP35822 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC31.01■■■□□ 2.55
PtprkP35822 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC31.01■■■□□ 2.55
PtprkP35822 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC31.01■■■□□ 2.55
PtprkP35822 Gm17641-201ENSMUST00000166328 2350 ntBASIC31■■■□□ 2.55
PtprkP35822 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PtprkP35822 Gm13509-201ENSMUST00000119733 1308 ntBASIC31■■■□□ 2.55
PtprkP35822 Gm5643-201ENSMUST00000117081 966 ntBASIC31■■■□□ 2.55
PtprkP35822 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC31■■■□□ 2.55
PtprkP35822 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC31■■■□□ 2.55
PtprkP35822 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
PtprkP35822 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
PtprkP35822 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC30.99■■■□□ 2.55
PtprkP35822 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
PtprkP35822 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC30.98■■■□□ 2.55
PtprkP35822 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC30.98■■■□□ 2.55
PtprkP35822 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PtprkP35822 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PtprkP35822 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
PtprkP35822 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC30.97■■■□□ 2.55
PtprkP35822 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PtprkP35822 Gm20100-201ENSMUST00000209418 2272 ntBASIC30.97■■■□□ 2.55
PtprkP35822 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PtprkP35822 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
PtprkP35822 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC30.96■■■□□ 2.55
PtprkP35822 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PtprkP35822 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PtprkP35822 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
PtprkP35822 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PtprkP35822 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
PtprkP35822 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
PtprkP35822 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
PtprkP35822 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
PtprkP35822 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PtprkP35822 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PtprkP35822 Gm12896-201ENSMUST00000118430 226 ntBASIC30.95■■■□□ 2.54
PtprkP35822 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC30.95■■■□□ 2.54
PtprkP35822 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC30.95■■■□□ 2.54
PtprkP35822 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
PtprkP35822 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
PtprkP35822 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
PtprkP35822 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PtprkP35822 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
PtprkP35822 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PtprkP35822 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
PtprkP35822 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PtprkP35822 AC121577.1-201ENSMUST00000227302 707 ntBASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms