Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sftpa1P35242 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sftpa1P35242 Gm12896-201ENSMUST00000118430 226 ntBASIC17.81■□□□□ 0.44
Sftpa1P35242 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.81■□□□□ 0.44
Sftpa1P35242 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sftpa1P35242 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sftpa1P35242 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sftpa1P35242 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Sftpa1P35242 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.8■□□□□ 0.44
Sftpa1P35242 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.8■□□□□ 0.44
Sftpa1P35242 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
Sftpa1P35242 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.8■□□□□ 0.44
Sftpa1P35242 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.8■□□□□ 0.44
Sftpa1P35242 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sftpa1P35242 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Sftpa1P35242 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sftpa1P35242 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.8■□□□□ 0.44
Sftpa1P35242 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.8■□□□□ 0.44
Sftpa1P35242 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sftpa1P35242 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
Sftpa1P35242 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sftpa1P35242 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sftpa1P35242 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sftpa1P35242 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Sftpa1P35242 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Sftpa1P35242 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sftpa1P35242 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sftpa1P35242 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.79■□□□□ 0.44
Sftpa1P35242 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sftpa1P35242 Gm13836-201ENSMUST00000121159 501 ntBASIC17.78■□□□□ 0.44
Sftpa1P35242 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.78■□□□□ 0.44
Sftpa1P35242 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Sftpa1P35242 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Sftpa1P35242 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.78■□□□□ 0.44
Sftpa1P35242 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.78■□□□□ 0.44
Sftpa1P35242 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sftpa1P35242 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sftpa1P35242 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Sftpa1P35242 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sftpa1P35242 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sftpa1P35242 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sftpa1P35242 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Sftpa1P35242 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sftpa1P35242 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Sftpa1P35242 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Gm7860-201ENSMUST00000121190 879 ntBASIC17.76■□□□□ 0.43
Sftpa1P35242 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.76■□□□□ 0.43
Sftpa1P35242 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sftpa1P35242 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Sftpa1P35242 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sftpa1P35242 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sftpa1P35242 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Gm5643-201ENSMUST00000117081 966 ntBASIC17.74■□□□□ 0.43
Sftpa1P35242 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.74■□□□□ 0.43
Sftpa1P35242 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sftpa1P35242 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sftpa1P35242 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Sftpa1P35242 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.73■□□□□ 0.43
Sftpa1P35242 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms