Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Slc6a1P31648 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Slc6a1P31648 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Gm14117-201ENSMUST00000122417 843 ntBASIC16.48■□□□□ 0.23
Slc6a1P31648 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a1P31648 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.48■□□□□ 0.23
Slc6a1P31648 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slc6a1P31648 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Slc6a1P31648 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.48■□□□□ 0.23
Slc6a1P31648 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.48■□□□□ 0.23
Slc6a1P31648 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Slc6a1P31648 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.47■□□□□ 0.23
Slc6a1P31648 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.47■□□□□ 0.23
Slc6a1P31648 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Slc6a1P31648 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Slc6a1P31648 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.46■□□□□ 0.23
Slc6a1P31648 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.46■□□□□ 0.23
Slc6a1P31648 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.46■□□□□ 0.23
Slc6a1P31648 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Slc6a1P31648 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Slc6a1P31648 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.45■□□□□ 0.22
Slc6a1P31648 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Slc6a1P31648 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.45■□□□□ 0.22
Slc6a1P31648 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.45■□□□□ 0.22
Slc6a1P31648 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.45■□□□□ 0.22
Slc6a1P31648 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Slc6a1P31648 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Slc6a1P31648 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a1P31648 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Slc6a1P31648 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.44■□□□□ 0.22
Slc6a1P31648 Gm7417-201ENSMUST00000192950 473 ntBASIC16.44■□□□□ 0.22
Slc6a1P31648 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Slc6a1P31648 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.44■□□□□ 0.22
Slc6a1P31648 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Slc6a1P31648 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.43■□□□□ 0.22
Slc6a1P31648 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Slc6a1P31648 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.43■□□□□ 0.22
Slc6a1P31648 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Slc6a1P31648 Gm10399-202ENSMUST00000202768 748 ntBASIC16.43■□□□□ 0.22
Slc6a1P31648 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.43■□□□□ 0.22
Slc6a1P31648 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Slc6a1P31648 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Slc6a1P31648 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a1P31648 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Slc6a1P31648 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.42■□□□□ 0.22
Slc6a1P31648 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Slc6a1P31648 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Slc6a1P31648 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms