Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nfkb1P25799 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Nfkb1P25799 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.73■□□□□ 0.75
Nfkb1P25799 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Nfkb1P25799 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.73■□□□□ 0.75
Nfkb1P25799 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.73■□□□□ 0.75
Nfkb1P25799 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nfkb1P25799 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.73■□□□□ 0.75
Nfkb1P25799 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.73■□□□□ 0.75
Nfkb1P25799 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nfkb1P25799 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfkb1P25799 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfkb1P25799 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.72■□□□□ 0.75
Nfkb1P25799 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.72■□□□□ 0.75
Nfkb1P25799 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nfkb1P25799 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nfkb1P25799 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nfkb1P25799 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.71■□□□□ 0.75
Nfkb1P25799 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Nfkb1P25799 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nfkb1P25799 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
Nfkb1P25799 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nfkb1P25799 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nfkb1P25799 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nfkb1P25799 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.7■□□□□ 0.74
Nfkb1P25799 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.69■□□□□ 0.74
Nfkb1P25799 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.69■□□□□ 0.74
Nfkb1P25799 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Nfkb1P25799 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Nfkb1P25799 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nfkb1P25799 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nfkb1P25799 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Nfkb1P25799 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nfkb1P25799 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nfkb1P25799 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Nfkb1P25799 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.67■□□□□ 0.74
Nfkb1P25799 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nfkb1P25799 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.66■□□□□ 0.74
Nfkb1P25799 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.66■□□□□ 0.74
Nfkb1P25799 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nfkb1P25799 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nfkb1P25799 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms