Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Irf8P23611 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.79■□□□□ 0.92
Irf8P23611 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.79■□□□□ 0.92
Irf8P23611 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.78■□□□□ 0.92
Irf8P23611 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf8P23611 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf8P23611 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf8P23611 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.78■□□□□ 0.92
Irf8P23611 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.78■□□□□ 0.92
Irf8P23611 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Irf8P23611 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Irf8P23611 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Irf8P23611 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.78■□□□□ 0.92
Irf8P23611 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.77■□□□□ 0.92
Irf8P23611 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.77■□□□□ 0.92
Irf8P23611 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Irf8P23611 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Irf8P23611 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Irf8P23611 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Irf8P23611 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Irf8P23611 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Irf8P23611 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.76■□□□□ 0.91
Irf8P23611 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Gm10493-201ENSMUST00000097270 612 ntBASIC20.76■□□□□ 0.91
Irf8P23611 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Irf8P23611 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Irf8P23611 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Irf8P23611 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Irf8P23611 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Irf8P23611 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.75■□□□□ 0.91
Irf8P23611 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf8P23611 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.75■□□□□ 0.91
Irf8P23611 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Irf8P23611 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Irf8P23611 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.74■□□□□ 0.91
Irf8P23611 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Irf8P23611 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.74■□□□□ 0.91
Irf8P23611 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Irf8P23611 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Irf8P23611 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Irf8P23611 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Irf8P23611 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Irf8P23611 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Irf8P23611 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Irf8P23611 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.72■□□□□ 0.91
Irf8P23611 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Irf8P23611 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Irf8P23611 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.72■□□□□ 0.91
Irf8P23611 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.71■□□□□ 0.91
Irf8P23611 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.71■□□□□ 0.91
Irf8P23611 Gm9988-201ENSMUST00000069786 435 ntBASIC20.71■□□□□ 0.91
Irf8P23611 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
Irf8P23611 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Irf8P23611 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.7■□□□□ 0.9
Irf8P23611 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Gm15039-201ENSMUST00000118914 875 ntBASIC20.7■□□□□ 0.9
Irf8P23611 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Irf8P23611 Gm38205-201ENSMUST00000192243 258 ntBASIC20.7■□□□□ 0.9
Irf8P23611 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Irf8P23611 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms