Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd48P18181 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
Cd48P18181 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.18■□□□□ 0.34
Cd48P18181 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.18■□□□□ 0.34
Cd48P18181 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cd48P18181 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Cd48P18181 Golgb1-201ENSMUST00000023534 498 ntBASIC17.18■□□□□ 0.34
Cd48P18181 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd48P18181 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cd48P18181 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd48P18181 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd48P18181 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cd48P18181 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.16■□□□□ 0.34
Cd48P18181 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd48P18181 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.16■□□□□ 0.34
Cd48P18181 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.16■□□□□ 0.34
Cd48P18181 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Cd48P18181 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cd48P18181 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cd48P18181 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cd48P18181 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.15■□□□□ 0.34
Cd48P18181 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cd48P18181 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd48P18181 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cd48P18181 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd48P18181 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cd48P18181 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.15■□□□□ 0.34
Cd48P18181 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.15■□□□□ 0.34
Cd48P18181 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cd48P18181 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cd48P18181 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.15■□□□□ 0.34
Cd48P18181 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Cd48P18181 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.14■□□□□ 0.33
Cd48P18181 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd48P18181 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cd48P18181 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.14■□□□□ 0.33
Cd48P18181 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cd48P18181 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.13■□□□□ 0.33
Cd48P18181 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cd48P18181 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.13■□□□□ 0.33
Cd48P18181 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cd48P18181 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.13■□□□□ 0.33
Cd48P18181 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cd48P18181 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd48P18181 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd48P18181 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cd48P18181 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cd48P18181 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cd48P18181 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.12■□□□□ 0.33
Cd48P18181 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cd48P18181 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Cd48P18181 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.11■□□□□ 0.33
Cd48P18181 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.11■□□□□ 0.33
Cd48P18181 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cd48P18181 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms