Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rb1P13405 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rb1P13405 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rb1P13405 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rb1P13405 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.47■□□□□ 0.71
Rb1P13405 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.47■□□□□ 0.71
Rb1P13405 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rb1P13405 Gm9988-201ENSMUST00000069786 435 ntBASIC19.47■□□□□ 0.71
Rb1P13405 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rb1P13405 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Rb1P13405 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rb1P13405 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rb1P13405 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.46■□□□□ 0.71
Rb1P13405 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rb1P13405 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.46■□□□□ 0.71
Rb1P13405 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Rb1P13405 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rb1P13405 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.45■□□□□ 0.7
Rb1P13405 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rb1P13405 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rb1P13405 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rb1P13405 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.45■□□□□ 0.7
Rb1P13405 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rb1P13405 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Rb1P13405 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rb1P13405 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rb1P13405 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Rb1P13405 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.44■□□□□ 0.7
Rb1P13405 Gm13234-201ENSMUST00000120010 747 ntBASIC19.44■□□□□ 0.7
Rb1P13405 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.44■□□□□ 0.7
Rb1P13405 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.44■□□□□ 0.7
Rb1P13405 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rb1P13405 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rb1P13405 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.43■□□□□ 0.7
Rb1P13405 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rb1P13405 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rb1P13405 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rb1P13405 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rb1P13405 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.42■□□□□ 0.7
Rb1P13405 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.42■□□□□ 0.7
Rb1P13405 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rb1P13405 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.42■□□□□ 0.7
Rb1P13405 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
Rb1P13405 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rb1P13405 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rb1P13405 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rb1P13405 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rb1P13405 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rb1P13405 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rb1P13405 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.4■□□□□ 0.7
Rb1P13405 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.4■□□□□ 0.7
Rb1P13405 Gm27801-201ENSMUST00000184174 223 ntBASIC19.4■□□□□ 0.7
Rb1P13405 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.4■□□□□ 0.7
Rb1P13405 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rb1P13405 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rb1P13405 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rb1P13405 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rb1P13405 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rb1P13405 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
Rb1P13405 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rb1P13405 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rb1P13405 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rb1P13405 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rb1P13405 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rb1P13405 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rb1P13405 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rb1P13405 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms