Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.09■□□□□ 0.33
Ccl3P10855 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.09■□□□□ 0.33
Ccl3P10855 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ccl3P10855 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ccl3P10855 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ccl3P10855 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccl3P10855 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Ccl3P10855 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccl3P10855 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ccl3P10855 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ccl3P10855 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl3P10855 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.08■□□□□ 0.32
Ccl3P10855 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl3P10855 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ccl3P10855 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.08■□□□□ 0.32
Ccl3P10855 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ccl3P10855 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccl3P10855 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccl3P10855 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Ccl3P10855 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.07■□□□□ 0.32
Ccl3P10855 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccl3P10855 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Ccl3P10855 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ccl3P10855 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.07■□□□□ 0.32
Ccl3P10855 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ccl3P10855 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Ccl3P10855 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccl3P10855 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ccl3P10855 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ccl3P10855 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ccl3P10855 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.05■□□□□ 0.32
Ccl3P10855 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Ccl3P10855 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccl3P10855 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccl3P10855 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Ccl3P10855 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Ccl3P10855 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ccl3P10855 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ccl3P10855 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccl3P10855 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl3P10855 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccl3P10855 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccl3P10855 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.04■□□□□ 0.32
Ccl3P10855 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Ccl3P10855 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
Ccl3P10855 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.03■□□□□ 0.32
Ccl3P10855 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl3P10855 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccl3P10855 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl3P10855 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ccl3P10855 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.03■□□□□ 0.32
Ccl3P10855 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccl3P10855 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccl3P10855 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.02■□□□□ 0.32
Ccl3P10855 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl3P10855 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.02■□□□□ 0.32
Ccl3P10855 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ccl3P10855 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl3P10855 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl3P10855 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.02■□□□□ 0.32
Ccl3P10855 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccl3P10855 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl3P10855 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Ccl3P10855 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ccl3P10855 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ccl3P10855 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Gm27275-201ENSMUST00000184318 272 ntBASIC17.01■□□□□ 0.31
Ccl3P10855 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Ccl3P10855 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ccl3P10855 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms