Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Gm7332-201ENSMUST00000118351 454 ntBASIC14.92□□□□□ -0.02
Ccl1P10146 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccl1P10146 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccl1P10146 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ccl1P10146 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.92□□□□□ -0.02
Ccl1P10146 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccl1P10146 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccl1P10146 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ccl1P10146 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.91□□□□□ -0.02
Ccl1P10146 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccl1P10146 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccl1P10146 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccl1P10146 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.9□□□□□ -0.02
Ccl1P10146 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccl1P10146 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ccl1P10146 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccl1P10146 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ccl1P10146 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ccl1P10146 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ccl1P10146 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl1P10146 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl1P10146 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ccl1P10146 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ccl1P10146 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.89□□□□□ -0.03
Ccl1P10146 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ccl1P10146 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccl1P10146 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.89□□□□□ -0.03
Ccl1P10146 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ccl1P10146 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ccl1P10146 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.88□□□□□ -0.03
Ccl1P10146 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl1P10146 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
Ccl1P10146 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC14.88□□□□□ -0.03
Ccl1P10146 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ccl1P10146 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.88□□□□□ -0.03
Ccl1P10146 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ccl1P10146 Grk6-206ENSMUST00000224995 2971 ntBASIC14.88□□□□□ -0.03
Ccl1P10146 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccl1P10146 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl1P10146 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.87□□□□□ -0.03
Ccl1P10146 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Ccl1P10146 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccl1P10146 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.87□□□□□ -0.03
Ccl1P10146 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccl1P10146 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl1P10146 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.87□□□□□ -0.03
Ccl1P10146 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccl1P10146 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 BC021767-201ENSMUST00000126387 1716 ntBASIC14.86□□□□□ -0.03
Ccl1P10146 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccl1P10146 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ccl1P10146 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccl1P10146 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms