Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Hoxa9P09631 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.35■□□□□ 0.69
Hoxa9P09631 Gm38205-201ENSMUST00000192243 258 ntBASIC19.35■□□□□ 0.69
Hoxa9P09631 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa9P09631 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Hoxa9P09631 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxa9P09631 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa9P09631 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.34■□□□□ 0.69
Hoxa9P09631 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxa9P09631 Gm13534-201ENSMUST00000121169 513 ntBASIC19.34■□□□□ 0.69
Hoxa9P09631 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxa9P09631 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa9P09631 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa9P09631 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxa9P09631 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa9P09631 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa9P09631 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.33■□□□□ 0.69
Hoxa9P09631 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.33■□□□□ 0.69
Hoxa9P09631 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
Hoxa9P09631 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.33■□□□□ 0.68
Hoxa9P09631 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.33■□□□□ 0.68
Hoxa9P09631 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxa9P09631 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxa9P09631 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.33■□□□□ 0.68
Hoxa9P09631 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hoxa9P09631 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hoxa9P09631 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Hoxa9P09631 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa9P09631 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa9P09631 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa9P09631 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hoxa9P09631 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.31■□□□□ 0.68
Hoxa9P09631 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hoxa9P09631 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.31■□□□□ 0.68
Hoxa9P09631 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.31■□□□□ 0.68
Hoxa9P09631 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hoxa9P09631 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hoxa9P09631 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa9P09631 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hoxa9P09631 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hoxa9P09631 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.3■□□□□ 0.68
Hoxa9P09631 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.29■□□□□ 0.68
Hoxa9P09631 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxa9P09631 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.29■□□□□ 0.68
Hoxa9P09631 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.29■□□□□ 0.68
Hoxa9P09631 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Hoxa9P09631 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hoxa9P09631 Iqck-206ENSMUST00000208658 2891 ntBASIC19.29■□□□□ 0.68
Hoxa9P09631 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.29■□□□□ 0.68
Hoxa9P09631 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hoxa9P09631 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hoxa9P09631 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hoxa9P09631 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hoxa9P09631 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Gm6365-201ENSMUST00000054711 744 ntBASIC19.28■□□□□ 0.68
Hoxa9P09631 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Hoxa9P09631 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Hoxa9P09631 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hoxa9P09631 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms