Protein–RNA interactions for Protein: P09092

Hoxa6, Homeobox protein Hox-A6, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa6P09092 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hoxa6P09092 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.49■□□□□ 0.23
Hoxa6P09092 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.48■□□□□ 0.23
Hoxa6P09092 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.48■□□□□ 0.23
Hoxa6P09092 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.48■□□□□ 0.23
Hoxa6P09092 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.48■□□□□ 0.23
Hoxa6P09092 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Hoxa6P09092 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hoxa6P09092 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxa6P09092 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxa6P09092 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Hoxa6P09092 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.47■□□□□ 0.23
Hoxa6P09092 Gm10602-201ENSMUST00000098239 609 ntBASIC16.47■□□□□ 0.23
Hoxa6P09092 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.47■□□□□ 0.23
Hoxa6P09092 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.47■□□□□ 0.23
Hoxa6P09092 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hoxa6P09092 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxa6P09092 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxa6P09092 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxa6P09092 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hoxa6P09092 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Hoxa6P09092 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.46■□□□□ 0.22
Hoxa6P09092 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Hoxa6P09092 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxa6P09092 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.44■□□□□ 0.22
Hoxa6P09092 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxa6P09092 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxa6P09092 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hoxa6P09092 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.44■□□□□ 0.22
Hoxa6P09092 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hoxa6P09092 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxa6P09092 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxa6P09092 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxa6P09092 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxa6P09092 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxa6P09092 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxa6P09092 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxa6P09092 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hoxa6P09092 Gm13534-201ENSMUST00000121169 513 ntBASIC16.43■□□□□ 0.22
Hoxa6P09092 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.43■□□□□ 0.22
Hoxa6P09092 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxa6P09092 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hoxa6P09092 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.43■□□□□ 0.22
Hoxa6P09092 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hoxa6P09092 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.42■□□□□ 0.22
Hoxa6P09092 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.42■□□□□ 0.22
Hoxa6P09092 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxa6P09092 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hoxa6P09092 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms