Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.72■□□□□ 0.91
Hoxc8P09025 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Hoxc8P09025 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Hoxc8P09025 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.72■□□□□ 0.91
Hoxc8P09025 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Hoxc8P09025 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxc8P09025 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hoxc8P09025 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.71■□□□□ 0.91
Hoxc8P09025 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxc8P09025 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
Hoxc8P09025 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.7■□□□□ 0.91
Hoxc8P09025 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.7■□□□□ 0.9
Hoxc8P09025 Trmt13-210ENSMUST00000198454 880 ntBASIC20.7■□□□□ 0.9
Hoxc8P09025 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.7■□□□□ 0.9
Hoxc8P09025 Gm10252-201ENSMUST00000209541 832 ntBASIC20.7■□□□□ 0.9
Hoxc8P09025 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
Hoxc8P09025 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxc8P09025 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.7■□□□□ 0.9
Hoxc8P09025 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hoxc8P09025 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.69■□□□□ 0.9
Hoxc8P09025 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.69■□□□□ 0.9
Hoxc8P09025 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Hoxc8P09025 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxc8P09025 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.68■□□□□ 0.9
Hoxc8P09025 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Hoxc8P09025 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxc8P09025 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc8P09025 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxc8P09025 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.67■□□□□ 0.9
Hoxc8P09025 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Hoxc8P09025 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxc8P09025 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Hoxc8P09025 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.66■□□□□ 0.9
Hoxc8P09025 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hoxc8P09025 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxc8P09025 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Hoxc8P09025 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc8P09025 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc8P09025 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxc8P09025 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxc8P09025 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxc8P09025 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxc8P09025 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms