Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Col4a2P08122 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.15■□□□□ 0.5
Col4a2P08122 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Col4a2P08122 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Col4a2P08122 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.15■□□□□ 0.5
Col4a2P08122 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.15■□□□□ 0.5
Col4a2P08122 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Col4a2P08122 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Col4a2P08122 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.14■□□□□ 0.5
Col4a2P08122 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Col4a2P08122 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a2P08122 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.14■□□□□ 0.49
Col4a2P08122 Gm10812-201ENSMUST00000099864 546 ntBASIC18.14■□□□□ 0.49
Col4a2P08122 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Col4a2P08122 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a2P08122 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.13■□□□□ 0.49
Col4a2P08122 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a2P08122 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a2P08122 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a2P08122 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Col4a2P08122 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col4a2P08122 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col4a2P08122 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a2P08122 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Col4a2P08122 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Col4a2P08122 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.12■□□□□ 0.49
Col4a2P08122 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Col4a2P08122 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Col4a2P08122 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.11■□□□□ 0.49
Col4a2P08122 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.11■□□□□ 0.49
Col4a2P08122 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a2P08122 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a2P08122 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a2P08122 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a2P08122 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Col4a2P08122 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a2P08122 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col4a2P08122 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.1■□□□□ 0.49
Col4a2P08122 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a2P08122 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a2P08122 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.09■□□□□ 0.49
Col4a2P08122 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.09■□□□□ 0.49
Col4a2P08122 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col4a2P08122 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a2P08122 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a2P08122 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a2P08122 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.08■□□□□ 0.48
Col4a2P08122 Rab3c-203ENSMUST00000224180 967 ntBASIC18.08■□□□□ 0.48
Col4a2P08122 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a2P08122 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a2P08122 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Col4a2P08122 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a2P08122 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Col4a2P08122 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col4a2P08122 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Col4a2P08122 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a2P08122 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a2P08122 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.06■□□□□ 0.48
Col4a2P08122 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a2P08122 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col4a2P08122 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a2P08122 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col4a2P08122 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a2P08122 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a2P08122 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a2P08122 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a2P08122 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms