Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.13■□□□□ 0.33
P06344 Gm18671-201ENSMUST00000214826 683 ntBASIC17.13■□□□□ 0.33
P06344 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P06344 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.12■□□□□ 0.33
P06344 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.12■□□□□ 0.33
P06344 Gm42778-201ENSMUST00000199644 553 ntBASIC17.12■□□□□ 0.33
P06344 Gm42569-201ENSMUST00000200539 472 ntBASIC17.12■□□□□ 0.33
P06344 Gm10033-202ENSMUST00000211874 928 ntBASIC17.12■□□□□ 0.33
P06344 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
P06344 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P06344 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P06344 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
P06344 Gm10849-201ENSMUST00000100397 618 ntBASIC17.11■□□□□ 0.33
P06344 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.11■□□□□ 0.33
P06344 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P06344 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P06344 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06344 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06344 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06344 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.1■□□□□ 0.33
P06344 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
P06344 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.1■□□□□ 0.33
P06344 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.1■□□□□ 0.33
P06344 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
P06344 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06344 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P06344 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P06344 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.09■□□□□ 0.33
P06344 Reep4-203ENSMUST00000226563 1444 ntBASIC17.09■□□□□ 0.33
P06344 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P06344 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
P06344 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P06344 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.33
P06344 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P06344 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
P06344 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P06344 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P06344 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.08■□□□□ 0.32
P06344 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P06344 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P06344 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.07■□□□□ 0.32
P06344 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.07■□□□□ 0.32
P06344 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
P06344 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.07■□□□□ 0.32
P06344 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
P06344 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06344 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06344 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
P06344 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06344 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
P06344 Gm13234-201ENSMUST00000120010 747 ntBASIC17.06■□□□□ 0.32
P06344 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms