Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.04■□□□□ 0.16
Cd74P04441 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.04■□□□□ 0.16
Cd74P04441 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.04■□□□□ 0.16
Cd74P04441 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.04■□□□□ 0.16
Cd74P04441 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.04■□□□□ 0.16
Cd74P04441 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cd74P04441 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Gm12251-201ENSMUST00000117893 792 ntBASIC16.03■□□□□ 0.16
Cd74P04441 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Gm43060-201ENSMUST00000200621 289 ntBASIC16.03■□□□□ 0.16
Cd74P04441 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.03■□□□□ 0.16
Cd74P04441 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cd74P04441 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cd74P04441 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Cd74P04441 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cd74P04441 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cd74P04441 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cd74P04441 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.03■□□□□ 0.16
Cd74P04441 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Cd74P04441 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd74P04441 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd74P04441 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cd74P04441 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cd74P04441 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd74P04441 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cd74P04441 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cd74P04441 Gm5874-201ENSMUST00000096101 508 ntBASIC16.02■□□□□ 0.16
Cd74P04441 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cd74P04441 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cd74P04441 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cd74P04441 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cd74P04441 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cd74P04441 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cd74P04441 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cd74P04441 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Cd74P04441 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cd74P04441 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cd74P04441 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd74P04441 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cd74P04441 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cd74P04441 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cd74P04441 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Cd74P04441 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.99■□□□□ 0.15
Cd74P04441 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.99■□□□□ 0.15
Cd74P04441 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Mir6236-201ENSMUST00000184437 123 ntBASIC15.99■□□□□ 0.15
Cd74P04441 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.99■□□□□ 0.15
Cd74P04441 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.99■□□□□ 0.15
Cd74P04441 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cd74P04441 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.98■□□□□ 0.15
Cd74P04441 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms