Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
IghmP01872 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
IghmP01872 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.03■□□□□ 0.48
IghmP01872 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.03■□□□□ 0.48
IghmP01872 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
IghmP01872 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IghmP01872 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
IghmP01872 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.02■□□□□ 0.48
IghmP01872 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IghmP01872 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
IghmP01872 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
IghmP01872 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
IghmP01872 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
IghmP01872 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
IghmP01872 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IghmP01872 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.01■□□□□ 0.47
IghmP01872 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.01■□□□□ 0.47
IghmP01872 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
IghmP01872 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
IghmP01872 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
IghmP01872 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
IghmP01872 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18■□□□□ 0.47
IghmP01872 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18■□□□□ 0.47
IghmP01872 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18■□□□□ 0.47
IghmP01872 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18■□□□□ 0.47
IghmP01872 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18■□□□□ 0.47
IghmP01872 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
IghmP01872 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Gm21956-201ENSMUST00000179946 522 ntBASIC17.99■□□□□ 0.47
IghmP01872 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.99■□□□□ 0.47
IghmP01872 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
IghmP01872 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
IghmP01872 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.98■□□□□ 0.47
IghmP01872 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IghmP01872 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.98■□□□□ 0.47
IghmP01872 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.98■□□□□ 0.47
IghmP01872 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.98■□□□□ 0.47
IghmP01872 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
IghmP01872 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
IghmP01872 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
IghmP01872 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
IghmP01872 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
IghmP01872 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.97■□□□□ 0.47
IghmP01872 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
IghmP01872 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
IghmP01872 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IghmP01872 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
IghmP01872 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
IghmP01872 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
IghmP01872 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
IghmP01872 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.96■□□□□ 0.47
IghmP01872 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
IghmP01872 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
IghmP01872 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.96■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms