Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
P01852 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.52■□□□□ 0.4
P01852 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
P01852 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
P01852 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
P01852 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Gm8495-201ENSMUST00000188740 694 ntBASIC17.51■□□□□ 0.39
P01852 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
P01852 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.51■□□□□ 0.39
P01852 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Gm10493-201ENSMUST00000097270 612 ntBASIC17.51■□□□□ 0.39
P01852 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
P01852 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.5■□□□□ 0.39
P01852 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.5■□□□□ 0.39
P01852 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
P01852 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.5■□□□□ 0.39
P01852 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
P01852 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.49■□□□□ 0.39
P01852 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
P01852 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Gm5874-201ENSMUST00000096101 508 ntBASIC17.49■□□□□ 0.39
P01852 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
P01852 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.48■□□□□ 0.39
P01852 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
P01852 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.48■□□□□ 0.39
P01852 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.48■□□□□ 0.39
P01852 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
P01852 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
P01852 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
P01852 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
P01852 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
P01852 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
P01852 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.46■□□□□ 0.39
P01852 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
P01852 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
P01852 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.45■□□□□ 0.38
P01852 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.45■□□□□ 0.38
P01852 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.45■□□□□ 0.38
P01852 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.45■□□□□ 0.38
P01852 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
P01852 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms