Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Igh-VJ558P01758 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igh-VJ558P01758 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Igh-VJ558P01758 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Igh-VJ558P01758 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igh-VJ558P01758 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Golph3-205ENSMUST00000228671 2842 ntBASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igh-VJ558P01758 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igh-VJ558P01758 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Gm27801-201ENSMUST00000184174 223 ntBASIC16.61■□□□□ 0.25
Igh-VJ558P01758 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igh-VJ558P01758 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 BC021767-201ENSMUST00000126387 1716 ntBASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Igh-VJ558P01758 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.59■□□□□ 0.25
Igh-VJ558P01758 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms