Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Syn1O88935 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Syn1O88935 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Syn1O88935 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Syn1O88935 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Syn1O88935 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syn1O88935 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Syn1O88935 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.83■□□□□ 0.77
Syn1O88935 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.83■□□□□ 0.77
Syn1O88935 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.83■□□□□ 0.77
Syn1O88935 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Syn1O88935 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.83■□□□□ 0.77
Syn1O88935 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.83■□□□□ 0.77
Syn1O88935 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Syn1O88935 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syn1O88935 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syn1O88935 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syn1O88935 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Syn1O88935 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Syn1O88935 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
Syn1O88935 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Syn1O88935 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.82■□□□□ 0.76
Syn1O88935 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.82■□□□□ 0.76
Syn1O88935 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Syn1O88935 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.82■□□□□ 0.76
Syn1O88935 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Syn1O88935 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Syn1O88935 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Syn1O88935 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.81■□□□□ 0.76
Syn1O88935 Gm2559-201ENSMUST00000201323 363 ntBASIC19.81■□□□□ 0.76
Syn1O88935 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.81■□□□□ 0.76
Syn1O88935 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Syn1O88935 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Syn1O88935 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
Syn1O88935 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.8■□□□□ 0.76
Syn1O88935 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.8■□□□□ 0.76
Syn1O88935 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Syn1O88935 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Syn1O88935 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
Syn1O88935 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.79■□□□□ 0.76
Syn1O88935 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Syn1O88935 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Syn1O88935 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Syn1O88935 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Syn1O88935 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Syn1O88935 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Syn1O88935 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syn1O88935 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syn1O88935 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syn1O88935 Gm21362-201ENSMUST00000194272 928 ntBASIC19.78■□□□□ 0.76
Syn1O88935 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Syn1O88935 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Syn1O88935 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Syn1O88935 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Syn1O88935 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.77■□□□□ 0.76
Syn1O88935 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Syn1O88935 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Syn1O88935 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.77■□□□□ 0.76
Syn1O88935 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Syn1O88935 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Syn1O88935 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Syn1O88935 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms