Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Best1O88870 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Best1O88870 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Best1O88870 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Best1O88870 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Best1O88870 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.54■□□□□ 0.56
Best1O88870 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.54■□□□□ 0.56
Best1O88870 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.54■□□□□ 0.56
Best1O88870 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Best1O88870 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Best1O88870 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Best1O88870 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Gm29257-201ENSMUST00000186115 639 ntBASIC18.53■□□□□ 0.56
Best1O88870 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.53■□□□□ 0.56
Best1O88870 Gm10602-201ENSMUST00000098239 609 ntBASIC18.53■□□□□ 0.56
Best1O88870 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Best1O88870 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Best1O88870 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.52■□□□□ 0.56
Best1O88870 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Best1O88870 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Gm7290-201ENSMUST00000104990 617 ntBASIC18.52■□□□□ 0.56
Best1O88870 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.52■□□□□ 0.56
Best1O88870 Gm12918-201ENSMUST00000120234 636 ntBASIC18.52■□□□□ 0.56
Best1O88870 Gm15710-201ENSMUST00000121821 636 ntBASIC18.52■□□□□ 0.56
Best1O88870 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.52■□□□□ 0.56
Best1O88870 Gm6420-201ENSMUST00000193885 723 ntBASIC18.52■□□□□ 0.56
Best1O88870 Gm5075-201ENSMUST00000196916 622 ntBASIC18.52■□□□□ 0.56
Best1O88870 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.52■□□□□ 0.56
Best1O88870 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.52■□□□□ 0.56
Best1O88870 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Best1O88870 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Best1O88870 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Best1O88870 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Best1O88870 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.51■□□□□ 0.55
Best1O88870 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.51■□□□□ 0.55
Best1O88870 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Best1O88870 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Best1O88870 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Best1O88870 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.51■□□□□ 0.55
Best1O88870 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Best1O88870 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Best1O88870 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Best1O88870 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.5■□□□□ 0.55
Best1O88870 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Best1O88870 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Best1O88870 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Best1O88870 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Best1O88870 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Best1O88870 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.49■□□□□ 0.55
Best1O88870 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Best1O88870 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Mir5133-201ENSMUST00000174955 77 ntBASIC18.48■□□□□ 0.55
Best1O88870 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.48■□□□□ 0.55
Best1O88870 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Best1O88870 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms