Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ShdO88834 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ShdO88834 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
ShdO88834 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShdO88834 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ShdO88834 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.62■□□□□ 0.73
ShdO88834 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ShdO88834 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ShdO88834 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ShdO88834 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.62■□□□□ 0.73
ShdO88834 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ShdO88834 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ShdO88834 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ShdO88834 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ShdO88834 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ShdO88834 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.61■□□□□ 0.73
ShdO88834 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ShdO88834 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ShdO88834 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ShdO88834 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ShdO88834 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ShdO88834 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
ShdO88834 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ShdO88834 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.6■□□□□ 0.73
ShdO88834 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ShdO88834 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ShdO88834 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.59■□□□□ 0.73
ShdO88834 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ShdO88834 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.59■□□□□ 0.73
ShdO88834 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ShdO88834 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShdO88834 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ShdO88834 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ShdO88834 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ShdO88834 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.58■□□□□ 0.72
ShdO88834 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ShdO88834 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ShdO88834 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShdO88834 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShdO88834 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ShdO88834 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
ShdO88834 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.57■□□□□ 0.72
ShdO88834 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ShdO88834 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.56■□□□□ 0.72
ShdO88834 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
ShdO88834 Gm27801-201ENSMUST00000184174 223 ntBASIC19.56■□□□□ 0.72
ShdO88834 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.56■□□□□ 0.72
ShdO88834 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ShdO88834 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ShdO88834 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ShdO88834 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ShdO88834 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ShdO88834 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ShdO88834 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShdO88834 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.54■□□□□ 0.72
ShdO88834 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShdO88834 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.54■□□□□ 0.72
ShdO88834 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ShdO88834 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ShdO88834 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
ShdO88834 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.54■□□□□ 0.72
ShdO88834 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.54■□□□□ 0.72
ShdO88834 Gm43060-201ENSMUST00000200621 289 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms