Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cldn1O88551 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cldn1O88551 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cldn1O88551 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cldn1O88551 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cldn1O88551 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cldn1O88551 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Gm37856-201ENSMUST00000191634 999 ntBASIC16.39■□□□□ 0.21
Cldn1O88551 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.39■□□□□ 0.21
Cldn1O88551 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cldn1O88551 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cldn1O88551 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cldn1O88551 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cldn1O88551 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn1O88551 Gm7290-201ENSMUST00000104990 617 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Gm12918-201ENSMUST00000120234 636 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Gm15710-201ENSMUST00000121821 636 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn1O88551 Gm5075-201ENSMUST00000196916 622 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.38■□□□□ 0.21
Cldn1O88551 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.38■□□□□ 0.21
Cldn1O88551 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.38■□□□□ 0.21
Cldn1O88551 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cldn1O88551 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.38■□□□□ 0.21
Cldn1O88551 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.37■□□□□ 0.21
Cldn1O88551 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cldn1O88551 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cldn1O88551 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.36■□□□□ 0.21
Cldn1O88551 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.36■□□□□ 0.21
Cldn1O88551 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cldn1O88551 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cldn1O88551 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.35■□□□□ 0.21
Cldn1O88551 Gm13146-201ENSMUST00000118508 780 ntBASIC16.35■□□□□ 0.21
Cldn1O88551 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Gm6420-201ENSMUST00000193885 723 ntBASIC16.35■□□□□ 0.21
Cldn1O88551 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.35■□□□□ 0.21
Cldn1O88551 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.35■□□□□ 0.21
Cldn1O88551 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Cldn1O88551 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cldn1O88551 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.34■□□□□ 0.21
Cldn1O88551 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.34■□□□□ 0.21
Cldn1O88551 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cldn1O88551 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.34■□□□□ 0.21
Cldn1O88551 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cldn1O88551 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.34■□□□□ 0.21
Cldn1O88551 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cldn1O88551 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms