Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cacna1hO88427 Gm21814-202ENSMUST00000203277 873 ntBASIC18.9■□□□□ 0.62
Cacna1hO88427 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cacna1hO88427 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cacna1hO88427 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1hO88427 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.89■□□□□ 0.61
Cacna1hO88427 Gm13559-201ENSMUST00000120476 863 ntBASIC18.89■□□□□ 0.61
Cacna1hO88427 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.89■□□□□ 0.61
Cacna1hO88427 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1hO88427 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.89■□□□□ 0.61
Cacna1hO88427 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1hO88427 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cacna1hO88427 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Cacna1hO88427 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
Cacna1hO88427 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cacna1hO88427 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.88■□□□□ 0.61
Cacna1hO88427 Gm17971-201ENSMUST00000190239 806 ntBASIC18.88■□□□□ 0.61
Cacna1hO88427 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1hO88427 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1hO88427 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Cacna1hO88427 Gm7461-201ENSMUST00000058918 827 ntBASIC18.87■□□□□ 0.61
Cacna1hO88427 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1hO88427 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cacna1hO88427 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cacna1hO88427 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Cacna1hO88427 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 Gm44771-201ENSMUST00000206975 626 ntBASIC18.86■□□□□ 0.61
Cacna1hO88427 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
Cacna1hO88427 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.86■□□□□ 0.61
Cacna1hO88427 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.86■□□□□ 0.61
Cacna1hO88427 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.86■□□□□ 0.61
Cacna1hO88427 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Cacna1hO88427 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cacna1hO88427 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.86■□□□□ 0.61
Cacna1hO88427 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cacna1hO88427 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.85■□□□□ 0.61
Cacna1hO88427 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.85■□□□□ 0.61
Cacna1hO88427 Gm11539-201ENSMUST00000119837 557 ntBASIC18.85■□□□□ 0.61
Cacna1hO88427 Gm13436-201ENSMUST00000120418 567 ntBASIC18.85■□□□□ 0.61
Cacna1hO88427 Gm6345-202ENSMUST00000180900 204 ntBASIC18.85■□□□□ 0.61
Cacna1hO88427 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cacna1hO88427 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.85■□□□□ 0.61
Cacna1hO88427 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacna1hO88427 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cacna1hO88427 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Gm5867-201ENSMUST00000063197 592 ntBASIC18.84■□□□□ 0.61
Cacna1hO88427 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.84■□□□□ 0.61
Cacna1hO88427 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Gm30025-201ENSMUST00000218555 728 ntBASIC18.84■□□□□ 0.61
Cacna1hO88427 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cacna1hO88427 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1hO88427 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1hO88427 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cacna1hO88427 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cacna1hO88427 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms