Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc3O88196 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc3O88196 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ttc3O88196 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc3O88196 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc3O88196 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc3O88196 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.3■□□□□ 0.84
Ttc3O88196 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ttc3O88196 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc3O88196 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc3O88196 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.29■□□□□ 0.84
Ttc3O88196 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ttc3O88196 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc3O88196 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc3O88196 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc3O88196 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Ttc3O88196 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc3O88196 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.27■□□□□ 0.84
Ttc3O88196 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc3O88196 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Ttc3O88196 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc3O88196 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc3O88196 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc3O88196 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ttc3O88196 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc3O88196 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc3O88196 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc3O88196 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc3O88196 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.26■□□□□ 0.83
Ttc3O88196 Gm10653-202ENSMUST00000139570 835 ntBASIC20.26■□□□□ 0.83
Ttc3O88196 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.26■□□□□ 0.83
Ttc3O88196 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc3O88196 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.26■□□□□ 0.83
Ttc3O88196 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc3O88196 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc3O88196 Gm12527-201ENSMUST00000117967 564 ntBASIC20.26■□□□□ 0.83
Ttc3O88196 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc3O88196 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc3O88196 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc3O88196 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.26■□□□□ 0.83
Ttc3O88196 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.25■□□□□ 0.83
Ttc3O88196 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.25■□□□□ 0.83
Ttc3O88196 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.25■□□□□ 0.83
Ttc3O88196 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ttc3O88196 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc3O88196 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
Ttc3O88196 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.25■□□□□ 0.83
Ttc3O88196 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc3O88196 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Ttc3O88196 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc3O88196 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.24■□□□□ 0.83
Ttc3O88196 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc3O88196 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.24■□□□□ 0.83
Ttc3O88196 Gm5408-201ENSMUST00000197998 747 ntBASIC20.24■□□□□ 0.83
Ttc3O88196 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc3O88196 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc3O88196 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.23■□□□□ 0.83
Ttc3O88196 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.23■□□□□ 0.83
Ttc3O88196 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc3O88196 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ttc3O88196 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.22■□□□□ 0.83
Ttc3O88196 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.22■□□□□ 0.83
Ttc3O88196 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.22■□□□□ 0.83
Ttc3O88196 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc3O88196 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc3O88196 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc3O88196 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc3O88196 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ttc3O88196 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms