Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.29□□□□□ -0.12
Rpl35aO55142 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpl35aO55142 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rpl35aO55142 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rpl35aO55142 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Gm18284-201ENSMUST00000172604 624 ntBASIC14.28□□□□□ -0.12
Rpl35aO55142 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.28□□□□□ -0.12
Rpl35aO55142 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.28□□□□□ -0.12
Rpl35aO55142 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rpl35aO55142 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpl35aO55142 AA386476-201ENSMUST00000098781 1665 ntBASIC14.28□□□□□ -0.12
Rpl35aO55142 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rpl35aO55142 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Rpl35aO55142 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.27□□□□□ -0.12
Rpl35aO55142 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpl35aO55142 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rpl35aO55142 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl35aO55142 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpl35aO55142 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl35aO55142 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpl35aO55142 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rpl35aO55142 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.26□□□□□ -0.13
Rpl35aO55142 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpl35aO55142 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm9988-201ENSMUST00000069786 435 ntBASIC14.26□□□□□ -0.13
Rpl35aO55142 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Rpl35aO55142 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpl35aO55142 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.26□□□□□ -0.13
Rpl35aO55142 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Rpl35aO55142 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rpl35aO55142 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC14.25□□□□□ -0.13
Rpl35aO55142 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rpl35aO55142 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.25□□□□□ -0.13
Rpl35aO55142 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rpl35aO55142 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpl35aO55142 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpl35aO55142 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpl35aO55142 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
Rpl35aO55142 Gm8495-201ENSMUST00000188740 694 ntBASIC14.24□□□□□ -0.13
Rpl35aO55142 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rpl35aO55142 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rpl35aO55142 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpl35aO55142 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpl35aO55142 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpl35aO55142 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpl35aO55142 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms