Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm15565-201ENSMUST00000118890 427 ntBASIC18.6■□□□□ 0.57
Cacna1bO55017 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Cacna1bO55017 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1bO55017 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1bO55017 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1bO55017 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1bO55017 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1bO55017 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.6■□□□□ 0.57
Cacna1bO55017 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.6■□□□□ 0.57
Cacna1bO55017 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Cacna1bO55017 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cacna1bO55017 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.59■□□□□ 0.57
Cacna1bO55017 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1bO55017 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1bO55017 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.59■□□□□ 0.57
Cacna1bO55017 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cacna1bO55017 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cacna1bO55017 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Cacna1bO55017 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.58■□□□□ 0.57
Cacna1bO55017 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.58■□□□□ 0.57
Cacna1bO55017 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cacna1bO55017 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cacna1bO55017 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Cacna1bO55017 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1bO55017 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1bO55017 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1bO55017 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cacna1bO55017 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1bO55017 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cacna1bO55017 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.57■□□□□ 0.56
Cacna1bO55017 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cacna1bO55017 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1bO55017 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cacna1bO55017 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1bO55017 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1bO55017 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.56■□□□□ 0.56
Cacna1bO55017 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1bO55017 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1bO55017 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cacna1bO55017 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cacna1bO55017 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.55■□□□□ 0.56
Cacna1bO55017 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1bO55017 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1bO55017 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.55■□□□□ 0.56
Cacna1bO55017 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cacna1bO55017 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1bO55017 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cacna1bO55017 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.54■□□□□ 0.56
Cacna1bO55017 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 Gm2559-201ENSMUST00000201323 363 ntBASIC18.54■□□□□ 0.56
Cacna1bO55017 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cacna1bO55017 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.54■□□□□ 0.56
Cacna1bO55017 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cacna1bO55017 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.53■□□□□ 0.56
Cacna1bO55017 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.53■□□□□ 0.56
Cacna1bO55017 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1bO55017 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1bO55017 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1bO55017 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cacna1bO55017 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.52■□□□□ 0.56
Cacna1bO55017 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.52■□□□□ 0.56
Cacna1bO55017 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Cacna1bO55017 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cacna1bO55017 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cacna1bO55017 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.51■□□□□ 0.55
Cacna1bO55017 Gm11643-201ENSMUST00000119578 864 ntBASIC18.51■□□□□ 0.55
Cacna1bO55017 Gm37055-201ENSMUST00000191866 133 ntBASIC18.51■□□□□ 0.55
Cacna1bO55017 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1bO55017 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cacna1bO55017 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cacna1bO55017 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Cacna1bO55017 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms