Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.26■□□□□ 0.67
Phox2bO35690 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Phox2bO35690 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Phox2bO35690 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Phox2bO35690 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phox2bO35690 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phox2bO35690 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phox2bO35690 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.25■□□□□ 0.67
Phox2bO35690 Gm5643-201ENSMUST00000117081 966 ntBASIC19.25■□□□□ 0.67
Phox2bO35690 Gm37055-201ENSMUST00000191866 133 ntBASIC19.25■□□□□ 0.67
Phox2bO35690 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Phox2bO35690 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Phox2bO35690 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Phox2bO35690 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.24■□□□□ 0.67
Phox2bO35690 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.24■□□□□ 0.67
Phox2bO35690 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Phox2bO35690 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Phox2bO35690 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Phox2bO35690 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phox2bO35690 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.23■□□□□ 0.67
Phox2bO35690 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Phox2bO35690 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phox2bO35690 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phox2bO35690 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.23■□□□□ 0.67
Phox2bO35690 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Phox2bO35690 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Phox2bO35690 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
Phox2bO35690 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.22■□□□□ 0.67
Phox2bO35690 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Phox2bO35690 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Phox2bO35690 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Phox2bO35690 Iqck-206ENSMUST00000208658 2891 ntBASIC19.22■□□□□ 0.67
Phox2bO35690 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Phox2bO35690 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Phox2bO35690 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Phox2bO35690 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Phox2bO35690 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Phox2bO35690 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Phox2bO35690 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Phox2bO35690 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Gm13146-201ENSMUST00000118508 780 ntBASIC19.2■□□□□ 0.66
Phox2bO35690 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Phox2bO35690 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Gm7367-201ENSMUST00000057611 492 ntBASIC19.2■□□□□ 0.66
Phox2bO35690 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Phox2bO35690 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.19■□□□□ 0.66
Phox2bO35690 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.19■□□□□ 0.66
Phox2bO35690 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Phox2bO35690 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Phox2bO35690 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.18■□□□□ 0.66
Phox2bO35690 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phox2bO35690 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Phox2bO35690 Gm26524-201ENSMUST00000192339 390 ntBASIC19.18■□□□□ 0.66
Phox2bO35690 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.18■□□□□ 0.66
Phox2bO35690 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phox2bO35690 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Phox2bO35690 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Phox2bO35690 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Phox2bO35690 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.17■□□□□ 0.66
Phox2bO35690 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.17■□□□□ 0.66
Phox2bO35690 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Phox2bO35690 Gm12896-201ENSMUST00000118430 226 ntBASIC19.16■□□□□ 0.66
Phox2bO35690 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms