Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Npc1O35604 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Npc1O35604 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Npc1O35604 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.71■□□□□ 0.59
Npc1O35604 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1O35604 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.71■□□□□ 0.59
Npc1O35604 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.71■□□□□ 0.59
Npc1O35604 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.71■□□□□ 0.59
Npc1O35604 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1O35604 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.71■□□□□ 0.59
Npc1O35604 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Npc1O35604 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.71■□□□□ 0.58
Npc1O35604 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Npc1O35604 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.7■□□□□ 0.58
Npc1O35604 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
Npc1O35604 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1O35604 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1O35604 Gm42642-201ENSMUST00000200683 355 ntBASIC18.7■□□□□ 0.58
Npc1O35604 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1O35604 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Npc1O35604 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1O35604 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1O35604 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.69■□□□□ 0.58
Npc1O35604 Gm42778-201ENSMUST00000199644 553 ntBASIC18.69■□□□□ 0.58
Npc1O35604 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1O35604 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Npc1O35604 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1O35604 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1O35604 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1O35604 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Npc1O35604 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.68■□□□□ 0.58
Npc1O35604 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.68■□□□□ 0.58
Npc1O35604 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.68■□□□□ 0.58
Npc1O35604 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
Npc1O35604 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Npc1O35604 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Npc1O35604 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Npc1O35604 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Npc1O35604 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Npc1O35604 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Npc1O35604 Gm18671-201ENSMUST00000214826 683 ntBASIC18.67■□□□□ 0.58
Npc1O35604 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.67■□□□□ 0.58
Npc1O35604 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Npc1O35604 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.66■□□□□ 0.58
Npc1O35604 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Npc1O35604 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.66■□□□□ 0.58
Npc1O35604 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.66■□□□□ 0.58
Npc1O35604 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.66■□□□□ 0.58
Npc1O35604 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.66■□□□□ 0.58
Npc1O35604 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Npc1O35604 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.65■□□□□ 0.58
Npc1O35604 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Npc1O35604 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Npc1O35604 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Npc1O35604 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Npc1O35604 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Npc1O35604 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Npc1O35604 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Npc1O35604 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 Gm10849-201ENSMUST00000100397 618 ntBASIC18.63■□□□□ 0.57
Npc1O35604 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Npc1O35604 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms