Protein–RNA interactions for Protein: O35488

Slc27a2, Very long-chain acyl-CoA synthetase, mousemouse

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc27a2O35488 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.34■□□□□ 0.69
Slc27a2O35488 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.34■□□□□ 0.69
Slc27a2O35488 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc27a2O35488 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc27a2O35488 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc27a2O35488 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc27a2O35488 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Slc27a2O35488 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.33■□□□□ 0.68
Slc27a2O35488 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc27a2O35488 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Slc27a2O35488 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.33■□□□□ 0.68
Slc27a2O35488 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc27a2O35488 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Slc27a2O35488 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Gm7417-201ENSMUST00000192950 473 ntBASIC19.32■□□□□ 0.68
Slc27a2O35488 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc27a2O35488 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Slc27a2O35488 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.31■□□□□ 0.68
Slc27a2O35488 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.31■□□□□ 0.68
Slc27a2O35488 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.31■□□□□ 0.68
Slc27a2O35488 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Slc27a2O35488 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc27a2O35488 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.31■□□□□ 0.68
Slc27a2O35488 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Slc27a2O35488 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc27a2O35488 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc27a2O35488 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Slc27a2O35488 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc27a2O35488 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc27a2O35488 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc27a2O35488 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc27a2O35488 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.29■□□□□ 0.68
Slc27a2O35488 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.29■□□□□ 0.68
Slc27a2O35488 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc27a2O35488 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc27a2O35488 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Slc27a2O35488 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
Slc27a2O35488 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slc27a2O35488 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.28■□□□□ 0.68
Slc27a2O35488 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.28■□□□□ 0.68
Slc27a2O35488 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.28■□□□□ 0.68
Slc27a2O35488 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slc27a2O35488 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc27a2O35488 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc27a2O35488 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc27a2O35488 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.27■□□□□ 0.68
Slc27a2O35488 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc27a2O35488 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Slc27a2O35488 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Slc27a2O35488 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.27■□□□□ 0.68
Slc27a2O35488 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms