Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col15a1O35206 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col15a1O35206 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Col15a1O35206 Gm12896-201ENSMUST00000118430 226 ntBASIC24.92■■□□□ 1.58
Col15a1O35206 Gm26971-201ENSMUST00000182423 1072 ntBASIC24.92■■□□□ 1.58
Col15a1O35206 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Col15a1O35206 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
Col15a1O35206 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col15a1O35206 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC24.91■■□□□ 1.58
Col15a1O35206 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Col15a1O35206 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Col15a1O35206 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Col15a1O35206 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Col15a1O35206 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC24.9■■□□□ 1.58
Col15a1O35206 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC24.9■■□□□ 1.58
Col15a1O35206 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Col15a1O35206 Mir7071-201ENSMUST00000184847 69 ntBASIC24.89■■□□□ 1.57
Col15a1O35206 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC24.88■■□□□ 1.57
Col15a1O35206 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
Col15a1O35206 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Col15a1O35206 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col15a1O35206 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col15a1O35206 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Col15a1O35206 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.87■■□□□ 1.57
Col15a1O35206 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col15a1O35206 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC24.87■■□□□ 1.57
Col15a1O35206 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.87■■□□□ 1.57
Col15a1O35206 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC24.87■■□□□ 1.57
Col15a1O35206 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Col15a1O35206 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
Col15a1O35206 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Col15a1O35206 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 Gm5643-201ENSMUST00000117081 966 ntBASIC24.86■■□□□ 1.57
Col15a1O35206 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Col15a1O35206 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Col15a1O35206 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.85■■□□□ 1.57
Col15a1O35206 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC24.85■■□□□ 1.57
Col15a1O35206 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.85■■□□□ 1.57
Col15a1O35206 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Col15a1O35206 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Mir6982-201ENSMUST00000184354 68 ntBASIC24.84■■□□□ 1.57
Col15a1O35206 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC24.84■■□□□ 1.57
Col15a1O35206 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
Col15a1O35206 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Col15a1O35206 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.84■■□□□ 1.57
Col15a1O35206 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
Col15a1O35206 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Col15a1O35206 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24.83■■□□□ 1.57
Col15a1O35206 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Gm29241-201ENSMUST00000189260 1096 ntBASIC24.83■■□□□ 1.57
Col15a1O35206 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
Col15a1O35206 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Col15a1O35206 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
Col15a1O35206 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Col15a1O35206 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Col15a1O35206 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.82■■□□□ 1.56
Col15a1O35206 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Col15a1O35206 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Col15a1O35206 Dio3-201ENSMUST00000097228 1449 ntBASIC24.82■■□□□ 1.56
Col15a1O35206 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC24.81■■□□□ 1.56
Col15a1O35206 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col15a1O35206 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
Col15a1O35206 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Col15a1O35206 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Col15a1O35206 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms