Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
Atn1O35126 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atn1O35126 Gm12922-201ENSMUST00000120626 809 ntBASIC18.71■□□□□ 0.59
Atn1O35126 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.71■□□□□ 0.59
Atn1O35126 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.71■□□□□ 0.59
Atn1O35126 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atn1O35126 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atn1O35126 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atn1O35126 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Atn1O35126 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Atn1O35126 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atn1O35126 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Atn1O35126 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.69■□□□□ 0.58
Atn1O35126 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.69■□□□□ 0.58
Atn1O35126 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.69■□□□□ 0.58
Atn1O35126 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Atn1O35126 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Atn1O35126 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.68■□□□□ 0.58
Atn1O35126 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.68■□□□□ 0.58
Atn1O35126 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Atn1O35126 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Atn1O35126 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atn1O35126 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atn1O35126 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atn1O35126 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Atn1O35126 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Atn1O35126 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Atn1O35126 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.66■□□□□ 0.58
Atn1O35126 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atn1O35126 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Atn1O35126 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atn1O35126 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Atn1O35126 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.66■□□□□ 0.58
Atn1O35126 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.66■□□□□ 0.58
Atn1O35126 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Atn1O35126 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Atn1O35126 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Atn1O35126 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Atn1O35126 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.65■□□□□ 0.58
Atn1O35126 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.65■□□□□ 0.58
Atn1O35126 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Atn1O35126 BC021767-201ENSMUST00000126387 1716 ntBASIC18.65■□□□□ 0.58
Atn1O35126 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Atn1O35126 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atn1O35126 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atn1O35126 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Atn1O35126 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Atn1O35126 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
Atn1O35126 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Atn1O35126 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.63■□□□□ 0.57
Atn1O35126 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Atn1O35126 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.62■□□□□ 0.57
Atn1O35126 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atn1O35126 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Atn1O35126 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms