Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr2jO08740 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr2jO08740 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Polr2jO08740 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr2jO08740 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.39■□□□□ 0.53
Polr2jO08740 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Polr2jO08740 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Polr2jO08740 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Polr2jO08740 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Polr2jO08740 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.38■□□□□ 0.53
Polr2jO08740 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.38■□□□□ 0.53
Polr2jO08740 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
Polr2jO08740 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Polr2jO08740 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Polr2jO08740 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Polr2jO08740 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.37■□□□□ 0.53
Polr2jO08740 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Polr2jO08740 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.37■□□□□ 0.53
Polr2jO08740 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Polr2jO08740 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Polr2jO08740 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.37■□□□□ 0.53
Polr2jO08740 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Polr2jO08740 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Polr2jO08740 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.36■□□□□ 0.53
Polr2jO08740 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Polr2jO08740 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.35■□□□□ 0.53
Polr2jO08740 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Polr2jO08740 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Polr2jO08740 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.35■□□□□ 0.53
Polr2jO08740 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.35■□□□□ 0.53
Polr2jO08740 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Polr2jO08740 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Polr2jO08740 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.34■□□□□ 0.53
Polr2jO08740 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.34■□□□□ 0.53
Polr2jO08740 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.34■□□□□ 0.53
Polr2jO08740 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
Polr2jO08740 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Polr2jO08740 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
Polr2jO08740 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Polr2jO08740 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Polr2jO08740 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Polr2jO08740 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2jO08740 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.33■□□□□ 0.52
Polr2jO08740 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2jO08740 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.33■□□□□ 0.52
Polr2jO08740 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Polr2jO08740 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2jO08740 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Polr2jO08740 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2jO08740 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2jO08740 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Polr2jO08740 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.32■□□□□ 0.52
Polr2jO08740 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms