Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Smad6-203ENSMUST00000179458 273 ntBASIC17.11■□□□□ 0.33
Raet1cO08604 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.11■□□□□ 0.33
Raet1cO08604 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.11■□□□□ 0.33
Raet1cO08604 Gm6139-201ENSMUST00000079261 882 ntBASIC17.11■□□□□ 0.33
Raet1cO08604 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1cO08604 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1cO08604 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Raet1cO08604 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.11■□□□□ 0.33
Raet1cO08604 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Raet1cO08604 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Raet1cO08604 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1cO08604 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Raet1cO08604 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1cO08604 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Raet1cO08604 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.1■□□□□ 0.33
Raet1cO08604 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.09■□□□□ 0.33
Raet1cO08604 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Raet1cO08604 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Raet1cO08604 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Raet1cO08604 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Raet1cO08604 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1cO08604 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1cO08604 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Raet1cO08604 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1cO08604 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Raet1cO08604 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Gm11421-201ENSMUST00000122124 294 ntBASIC17.07■□□□□ 0.32
Raet1cO08604 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.07■□□□□ 0.32
Raet1cO08604 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.07■□□□□ 0.32
Raet1cO08604 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Raet1cO08604 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Raet1cO08604 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1cO08604 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Raet1cO08604 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Raet1cO08604 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.06■□□□□ 0.32
Raet1cO08604 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.06■□□□□ 0.32
Raet1cO08604 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Raet1cO08604 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Raet1cO08604 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Raet1cO08604 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1cO08604 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Raet1cO08604 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Raet1cO08604 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Raet1cO08604 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Raet1cO08604 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1cO08604 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.04■□□□□ 0.32
Raet1cO08604 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.04■□□□□ 0.32
Raet1cO08604 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
Raet1cO08604 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Raet1cO08604 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1cO08604 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms