Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17■□□□□ 0.31
Raet1bO08603 Gm32699-201ENSMUST00000221728 1988 ntBASIC17■□□□□ 0.31
Raet1bO08603 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Raet1bO08603 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1bO08603 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Raet1bO08603 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Raet1bO08603 Gm43017-201ENSMUST00000198296 752 ntBASIC16.98■□□□□ 0.31
Raet1bO08603 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Raet1bO08603 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Raet1bO08603 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Raet1bO08603 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1bO08603 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Raet1bO08603 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.97■□□□□ 0.31
Raet1bO08603 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Raet1bO08603 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Raet1bO08603 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Raet1bO08603 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1bO08603 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.96■□□□□ 0.31
Raet1bO08603 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Raet1bO08603 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Raet1bO08603 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1bO08603 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.96■□□□□ 0.31
Raet1bO08603 Gm26833-201ENSMUST00000180899 440 ntBASIC16.96■□□□□ 0.31
Raet1bO08603 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1bO08603 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Raet1bO08603 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1bO08603 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Raet1bO08603 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Raet1bO08603 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Raet1bO08603 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Raet1bO08603 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Raet1bO08603 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Raet1bO08603 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Raet1bO08603 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Raet1bO08603 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
Raet1bO08603 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Raet1bO08603 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Raet1bO08603 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.95■□□□□ 0.3
Raet1bO08603 Gm40848-201ENSMUST00000221998 324 ntBASIC16.95■□□□□ 0.3
Raet1bO08603 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Raet1bO08603 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.94■□□□□ 0.3
Raet1bO08603 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Raet1bO08603 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Raet1bO08603 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.94■□□□□ 0.3
Raet1bO08603 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.94■□□□□ 0.3
Raet1bO08603 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Raet1bO08603 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Raet1bO08603 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.93■□□□□ 0.3
Raet1bO08603 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Raet1bO08603 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Raet1bO08603 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Raet1bO08603 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Raet1bO08603 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Raet1bO08603 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Raet1bO08603 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Raet1bO08603 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.92■□□□□ 0.3
Raet1bO08603 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Raet1bO08603 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms