Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdh9F8VPK8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 BC021767-201ENSMUST00000126387 1716 ntBASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdh9F8VPK8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Pcdh9F8VPK8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh9F8VPK8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh9F8VPK8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdh9F8VPK8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdh9F8VPK8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh9F8VPK8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh9F8VPK8 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh9F8VPK8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh9F8VPK8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh9F8VPK8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh9F8VPK8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh9F8VPK8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh9F8VPK8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms