Protein–RNA interactions for Protein: F6VCN9

Gm5861, Predicted gene 5861 (Fragment), mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5861F6VCN9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Gm5861F6VCN9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gm5861F6VCN9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gm5861F6VCN9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Gm5861F6VCN9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gm5861F6VCN9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gm5861F6VCN9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Gm5861F6VCN9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Gm5861F6VCN9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Gm5861F6VCN9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5861F6VCN9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm5861F6VCN9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm5861F6VCN9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.35■□□□□ 0.53
Gm5861F6VCN9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms