Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.51■□□□□ 0.71
Ccdc149F6V035 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc149F6V035 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.51■□□□□ 0.71
Ccdc149F6V035 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.51■□□□□ 0.71
Ccdc149F6V035 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Gm6365-201ENSMUST00000054711 744 ntBASIC19.51■□□□□ 0.71
Ccdc149F6V035 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc149F6V035 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Ccdc149F6V035 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc149F6V035 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc149F6V035 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc149F6V035 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.48■□□□□ 0.71
Ccdc149F6V035 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Gm12441-201ENSMUST00000121806 588 ntBASIC19.48■□□□□ 0.71
Ccdc149F6V035 Nespas-201ENSMUST00000143738 1083 ntBASIC19.48■□□□□ 0.71
Ccdc149F6V035 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc149F6V035 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc149F6V035 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc149F6V035 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc149F6V035 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc149F6V035 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc149F6V035 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc149F6V035 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc149F6V035 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc149F6V035 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Ccdc149F6V035 Notumos-201ENSMUST00000151998 2659 ntBASIC19.45■□□□□ 0.7
Ccdc149F6V035 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc149F6V035 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc149F6V035 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc149F6V035 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc149F6V035 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.43■□□□□ 0.7
Ccdc149F6V035 Gm4968-201ENSMUST00000071458 858 ntBASIC19.43■□□□□ 0.7
Ccdc149F6V035 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc149F6V035 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc149F6V035 Gm5408-201ENSMUST00000197998 747 ntBASIC19.41■□□□□ 0.7
Ccdc149F6V035 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc149F6V035 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms