Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Ube4aE9Q735 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Gm20760-201ENSMUST00000179197 648 ntBASIC23.23■■□□□ 1.31
Ube4aE9Q735 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ube4aE9Q735 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.22■■□□□ 1.31
Ube4aE9Q735 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.22■■□□□ 1.31
Ube4aE9Q735 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.22■■□□□ 1.31
Ube4aE9Q735 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.22■■□□□ 1.31
Ube4aE9Q735 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ube4aE9Q735 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Gm20049-201ENSMUST00000219950 730 ntBASIC23.21■■□□□ 1.31
Ube4aE9Q735 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ube4aE9Q735 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ube4aE9Q735 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ube4aE9Q735 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Ube4aE9Q735 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Ube4aE9Q735 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Gm26524-201ENSMUST00000192339 390 ntBASIC23.19■■□□□ 1.3
Ube4aE9Q735 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ube4aE9Q735 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Ube4aE9Q735 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ube4aE9Q735 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Ube4aE9Q735 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ube4aE9Q735 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.16■■□□□ 1.3
Ube4aE9Q735 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ube4aE9Q735 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Ube4aE9Q735 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms