Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Col6a3E9PWQ3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.59■□□□□ 0.73
Col6a3E9PWQ3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.58■□□□□ 0.73
Col6a3E9PWQ3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Col6a3E9PWQ3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Col6a3E9PWQ3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col6a3E9PWQ3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a3E9PWQ3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Gm43183-201ENSMUST00000200632 547 ntBASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a3E9PWQ3 Gm28033-201ENSMUST00000184224 96 ntBASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Gm7063-201ENSMUST00000186840 981 ntBASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a3E9PWQ3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a3E9PWQ3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a3E9PWQ3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col6a3E9PWQ3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a3E9PWQ3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a3E9PWQ3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a3E9PWQ3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Col6a3E9PWQ3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a3E9PWQ3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.5■□□□□ 0.71
Col6a3E9PWQ3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms