Protein–RNA interactions for Protein: E9PW80

Gm3298, Predicted gene 3298, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3298E9PW80 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Gm3298E9PW80 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gm3298E9PW80 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3298E9PW80 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3298E9PW80 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Gm3298E9PW80 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gm3298E9PW80 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gm3298E9PW80 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.83■□□□□ 0.6
Gm3298E9PW80 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3298E9PW80 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Gm11421-201ENSMUST00000122124 294 ntBASIC18.82■□□□□ 0.6
Gm3298E9PW80 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3298E9PW80 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3298E9PW80 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.81■□□□□ 0.6
Gm3298E9PW80 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.81■□□□□ 0.6
Gm3298E9PW80 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.81■□□□□ 0.6
Gm3298E9PW80 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.81■□□□□ 0.6
Gm3298E9PW80 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Gm3298E9PW80 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.8■□□□□ 0.6
Gm3298E9PW80 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3298E9PW80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3298E9PW80 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3298E9PW80 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms