Protein–RNA interactions for Protein: E9PVL6

Trim30b, Tripartite motif-containing 30B, mousemouse

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30bE9PVL6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
Trim30bE9PVL6 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim30bE9PVL6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim30bE9PVL6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim30bE9PVL6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim30bE9PVL6 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.51■□□□□ 0.87
Trim30bE9PVL6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim30bE9PVL6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Gm20049-201ENSMUST00000219950 730 ntBASIC20.5■□□□□ 0.87
Trim30bE9PVL6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim30bE9PVL6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim30bE9PVL6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Gm22240-201ENSMUST00000175225 82 ntBASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Trim30bE9PVL6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.47■□□□□ 0.87
Trim30bE9PVL6 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim30bE9PVL6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim30bE9PVL6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trim30bE9PVL6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim30bE9PVL6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim30bE9PVL6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim30bE9PVL6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim30bE9PVL6 Gm8520-201ENSMUST00000186517 868 ntBASIC20.45■□□□□ 0.86
Trim30bE9PVL6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms