Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Shank1D3YZU1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.2■□□□□ 0.34
Shank1D3YZU1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Shank1D3YZU1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.19■□□□□ 0.34
Shank1D3YZU1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Shank1D3YZU1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Shank1D3YZU1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.17■□□□□ 0.34
Shank1D3YZU1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Shank1D3YZU1 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Dio3-201ENSMUST00000097228 1449 ntBASIC17.16■□□□□ 0.34
Shank1D3YZU1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.16■□□□□ 0.34
Shank1D3YZU1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.16■□□□□ 0.34
Shank1D3YZU1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Shank1D3YZU1 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Gm15565-201ENSMUST00000118890 427 ntBASIC17.15■□□□□ 0.34
Shank1D3YZU1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank1D3YZU1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Shank1D3YZU1 Gm6576-201ENSMUST00000169678 883 ntBASIC17.15■□□□□ 0.34
Shank1D3YZU1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.15■□□□□ 0.34
Shank1D3YZU1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Shank1D3YZU1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Shank1D3YZU1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.13■□□□□ 0.33
Shank1D3YZU1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Shank1D3YZU1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Shank1D3YZU1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Shank1D3YZU1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.12■□□□□ 0.33
Shank1D3YZU1 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms