Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx8D3YU81 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rfx8D3YU81 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx8D3YU81 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.33■□□□□ 0.84
Rfx8D3YU81 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx8D3YU81 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Gm27801-201ENSMUST00000184174 223 ntBASIC20.32■□□□□ 0.84
Rfx8D3YU81 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx8D3YU81 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.31■□□□□ 0.84
Rfx8D3YU81 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx8D3YU81 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rfx8D3YU81 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rfx8D3YU81 Gm15039-201ENSMUST00000118914 875 ntBASIC20.28■□□□□ 0.84
Rfx8D3YU81 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.28■□□□□ 0.84
Rfx8D3YU81 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx8D3YU81 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rfx8D3YU81 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rfx8D3YU81 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rfx8D3YU81 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rfx8D3YU81 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rfx8D3YU81 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rfx8D3YU81 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rfx8D3YU81 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rfx8D3YU81 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms