Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Col6a5A6H584 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a5A6H584 Gm13158-201ENSMUST00000122007 736 ntBASIC14.72□□□□□ -0.05
Col6a5A6H584 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a5A6H584 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Col6a5A6H584 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a5A6H584 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a5A6H584 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a5A6H584 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a5A6H584 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Col6a5A6H584 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a5A6H584 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a5A6H584 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col6a5A6H584 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a5A6H584 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.69□□□□□ -0.06
Col6a5A6H584 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.69□□□□□ -0.06
Col6a5A6H584 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.69□□□□□ -0.06
Col6a5A6H584 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a5A6H584 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.69□□□□□ -0.06
Col6a5A6H584 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a5A6H584 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a5A6H584 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Col6a5A6H584 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a5A6H584 Gm6345-202ENSMUST00000180900 204 ntBASIC14.68□□□□□ -0.06
Col6a5A6H584 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.68□□□□□ -0.06
Col6a5A6H584 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a5A6H584 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Col6a5A6H584 Gm13559-201ENSMUST00000120476 863 ntBASIC14.67□□□□□ -0.06
Col6a5A6H584 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.67□□□□□ -0.06
Col6a5A6H584 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Col6a5A6H584 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.67□□□□□ -0.06
Col6a5A6H584 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.67□□□□□ -0.06
Col6a5A6H584 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.67□□□□□ -0.06
Col6a5A6H584 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.67□□□□□ -0.06
Col6a5A6H584 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col6a5A6H584 Gm9103-201ENSMUST00000119371 405 ntBASIC14.66□□□□□ -0.06
Col6a5A6H584 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col6a5A6H584 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a5A6H584 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a5A6H584 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a5A6H584 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col6a5A6H584 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.65□□□□□ -0.06
Col6a5A6H584 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a5A6H584 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.65□□□□□ -0.06
Col6a5A6H584 Gm30025-201ENSMUST00000218555 728 ntBASIC14.65□□□□□ -0.06
Col6a5A6H584 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.65□□□□□ -0.06
Col6a5A6H584 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a5A6H584 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col6a5A6H584 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Col6a5A6H584 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Col6a5A6H584 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Col6a5A6H584 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.64□□□□□ -0.07
Col6a5A6H584 Gm11539-201ENSMUST00000119837 557 ntBASIC14.64□□□□□ -0.07
Col6a5A6H584 Gm13436-201ENSMUST00000120418 567 ntBASIC14.64□□□□□ -0.07
Col6a5A6H584 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Col6a5A6H584 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Col6a5A6H584 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms