Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chd6A3KFM7 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.83■□□□□ 0.12
Chd6A3KFM7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chd6A3KFM7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.81■□□□□ 0.12
Chd6A3KFM7 Gm30025-201ENSMUST00000218555 728 ntBASIC15.81■□□□□ 0.12
Chd6A3KFM7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chd6A3KFM7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.8■□□□□ 0.12
Chd6A3KFM7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.8■□□□□ 0.12
Chd6A3KFM7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chd6A3KFM7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Gm7153-201ENSMUST00000117092 455 ntBASIC15.79■□□□□ 0.12
Chd6A3KFM7 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.79■□□□□ 0.12
Chd6A3KFM7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chd6A3KFM7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.78■□□□□ 0.12
Chd6A3KFM7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chd6A3KFM7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Chd6A3KFM7 Gm7284-201ENSMUST00000131667 944 ntBASIC15.77■□□□□ 0.11
Chd6A3KFM7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Chd6A3KFM7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Gm6443-201ENSMUST00000203599 874 ntBASIC15.76■□□□□ 0.11
Chd6A3KFM7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Chd6A3KFM7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms