Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm18032-201ENSMUST00000222541 538 ntBASIC10.34□□□□□ -0.75
Ubr4A2AN08 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC10.33□□□□□ -0.76
Ubr4A2AN08 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Ubr4A2AN08 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC10.32□□□□□ -0.76
Ubr4A2AN08 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC10.32□□□□□ -0.76
Ubr4A2AN08 Gm10576-201ENSMUST00000191927 825 ntBASIC10.32□□□□□ -0.76
Ubr4A2AN08 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm18669-201ENSMUST00000216049 778 ntBASIC10.31□□□□□ -0.76
Ubr4A2AN08 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ubr4A2AN08 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.3□□□□□ -0.76
Ubr4A2AN08 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Gm17661-201ENSMUST00000170317 270 ntBASIC10.3□□□□□ -0.76
Ubr4A2AN08 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ubr4A2AN08 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ubr4A2AN08 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ubr4A2AN08 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms