Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Smad6-203ENSMUST00000179458 273 ntBASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd2l1A2A259 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Gm7291-201ENSMUST00000199147 382 ntBASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pkd2l1A2A259 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pkd2l1A2A259 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Gm26571-201ENSMUST00000181399 666 ntBASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.66■□□□□ 0.58
Pkd2l1A2A259 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.65■□□□□ 0.58
Pkd2l1A2A259 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.65■□□□□ 0.58
Pkd2l1A2A259 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Gm42569-201ENSMUST00000200539 472 ntBASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pkd2l1A2A259 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pkd2l1A2A259 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.64■□□□□ 0.58
Pkd2l1A2A259 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Gm42642-201ENSMUST00000200683 355 ntBASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pkd2l1A2A259 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.63■□□□□ 0.57
Pkd2l1A2A259 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms